IL_9NLB_087

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCUUUGAAGUG*CAUGGAGCC

Length

20 nucleotides

Bulged bases

9NLB|1|R1|U|2132, 9NLB|1|R1|A|2158

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R1|G|2128
9NLB|1|R1|C|2129
9NLB|1|R1|U|2130
9NLB|1|R1|U|2131
9NLB|1|R1|U|2132
9NLB|1|R1|G|2133
9NLB|1|R1|A|2134
9NLB|1|R1|A|2135
9NLB|1|R1|G|2136
9NLB|1|R1|U|2137
9NLB|1|R1|G|2138
*
9NLB|1|R1|C|2153
9NLB|1|R1|A|2154
9NLB|1|R1|U|2155
9NLB|1|R1|G|2156
9NLB|1|R1|G|2157
9NLB|1|R1|A|2158
9NLB|1|R1|G|2159
9NLB|1|R1|C|2160
9NLB|1|R1|C|2161

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL1