IL_9NLB_135

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGGGAG*CUCAUUGAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R3|G|450
9NLB|1|R3|A|451
9NLB|1|R3|A|452
9NLB|1|R3|G|453
9NLB|1|R3|G|454
9NLB|1|R3|G|455
9NLB|1|R3|A|456
9NLB|1|R3|G|457
*
9NLB|1|R3|C|475
9NLB|1|R3|U|476
9NLB|1|R3|C|477
9NLB|1|R3|A|478
9NLB|1|R3|U|479
9NLB|1|R3|U|480
9NLB|1|R3|G|481
9NLB|1|R3|A|482
9NLB|1|R3|C|483

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16