IL_9NLB_174

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUAG*CGCU

Length

9 nucleotides

Bulged bases

9NLB|1|R3|A|1441

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R3|G|1438
9NLB|1|R3|G|1439
9NLB|1|R3|U|1440
9NLB|1|R3|A|1441
9NLB|1|R3|G|1442
*
9NLB|1|R3|C|1460
9NLB|1|R3|G|1461
9NLB|1|R3|C|1462
9NLB|1|R3|U|1463

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L19

Chain R1

Large subunit ribosomal RNA; LSU rRNA

Chain st

30S ribosomal protein S20