IL_9NLE_001
3D structure
- PDB id
- 9NLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGC*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NLE_001 not in the Motif Atlas
- Geometric match to IL_4WF9_121
- Geometric discrepancy: 0.2045
- The information below is about IL_4WF9_121
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10892.1
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 39
Unit IDs
9NLE|1|R1|A|6
9NLE|1|R1|G|7
9NLE|1|R1|C|8
*
9NLE|1|R1|G|2895
9NLE|1|R1|C|2896
9NLE|1|R1|U|2897
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 13
- Large ribosomal subunit protein uL13
Coloring options: