IL_9NLE_032

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGCAAGGGGG*CUUACCAACCC

Length

21 nucleotides

Bulged bases

9NLE|1|R1|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R1|G|874
9NLE|1|R1|G|875
9NLE|1|R1|C|876
9NLE|1|R1|A|877
9NLE|1|R1|A|878
9NLE|1|R1|G|879
9NLE|1|R1|G|880
9NLE|1|R1|G|881
9NLE|1|R1|G|882
9NLE|1|R1|G|883
*
9NLE|1|R1|C|893
9NLE|1|R1|U|894
9NLE|1|R1|U|895
9NLE|1|R1|A|896
9NLE|1|R1|C|897
9NLE|1|R1|C|898
9NLE|1|R1|A|899
9NLE|1|R1|A|900
9NLE|1|R1|C|901
9NLE|1|R1|C|902
9NLE|1|R1|C|903

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 16

50S ribosomal protein L16