IL_9NLE_087

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUGUGUAGGAUAGGU*ACCCUUUA

Length

25 nucleotides

Bulged bases

9NLE|1|R1|G|2115

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R1|U|2106
9NLE|1|R1|G|2107
9NLE|1|R1|A|2108
9NLE|1|R1|U|2109
9NLE|1|R1|G|2110
9NLE|1|R1|U|2111
9NLE|1|R1|G|2112
9NLE|1|R1|U|2113
9NLE|1|R1|A|2114
9NLE|1|R1|G|2115
9NLE|1|R1|G|2116
9NLE|1|R1|A|2117
9NLE|1|R1|U|2118
9NLE|1|R1|A|2119
9NLE|1|R1|G|2120
9NLE|1|R1|G|2121
9NLE|1|R1|U|2122
*
9NLE|1|R1|A|2176
9NLE|1|R1|C|2177
9NLE|1|R1|C|2178
9NLE|1|R1|C|2179
9NLE|1|R1|U|2180
9NLE|1|R1|U|2181
9NLE|1|R1|U|2182
9NLE|1|R1|A|2183

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL1

Chain E

Energy-dependent translational throttle protein EttA