IL_9NLE_089

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUUGAAGU*AUGGAG

Length

15 nucleotides

Bulged bases

9NLE|1|R1|U|2132, 9NLE|1|R1|A|2134

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R1|C|2129
9NLE|1|R1|U|2130
9NLE|1|R1|U|2131
9NLE|1|R1|U|2132
9NLE|1|R1|G|2133
9NLE|1|R1|A|2134
9NLE|1|R1|A|2135
9NLE|1|R1|G|2136
9NLE|1|R1|U|2137
*
9NLE|1|R1|A|2154
9NLE|1|R1|U|2155
9NLE|1|R1|G|2156
9NLE|1|R1|G|2157
9NLE|1|R1|A|2158
9NLE|1|R1|G|2159

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL1