IL_9NLE_131

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAUAAC*GCUAAUAC

Length

14 nucleotides

Bulged bases

9NLE|1|R3|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R3|G|148
9NLE|1|R3|A|149
9NLE|1|R3|U|150
9NLE|1|R3|A|151
9NLE|1|R3|A|152
9NLE|1|R3|C|153
*
9NLE|1|R3|G|168
9NLE|1|R3|C|169
9NLE|1|R3|U|170
9NLE|1|R3|A|171
9NLE|1|R3|A|172
9NLE|1|R3|U|173
9NLE|1|R3|A|174
9NLE|1|R3|C|175

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain st

30S ribosomal protein S20