IL_9NLF_173

3D structure

PDB id

9NLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Hydrolytic 2/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

9NLF|1|R3|A|1493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLF|1|R3|C|1407
9NLF|1|R3|A|1408
9NLF|1|R3|C|1409
*
9NLF|1|R3|G|1491
9NLF|1|R3|A|1492
9NLF|1|R3|A|1493
9NLF|1|R3|G|1494

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain M

mRNA

Chain R1

Large subunit ribosomal RNA; LSU rRNA

Chain sl

Small ribosomal subunit protein uS12