IL_9NLH_008

3D structure

PDB id

9NLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with YheS-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9NLH_008 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.2593

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

9NLH|1|R1|C|269
9NLH|1|R1|A|270
9NLH|1|R1|G|271
*
9NLH|1|R1|C|366
9NLH|1|R1|G|367
9NLH|1|R1|A|368
9NLH|1|R1|U|369
9NLH|1|R1|G|370

Current chains

Chain R1

23S ribosomal RNA

Nearby chains