IL_9NLH_084

3D structure

PDB id

9NLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with YheS-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUGUGUAGGAUAG*CCUU

Length

17 nucleotides

Bulged bases

9NLH|1|R1|U|2113, 9NLH|1|R1|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLH|1|R1|A|2108
9NLH|1|R1|U|2109
9NLH|1|R1|G|2110
9NLH|1|R1|U|2111
9NLH|1|R1|G|2112
9NLH|1|R1|U|2113
9NLH|1|R1|A|2114
9NLH|1|R1|G|2115
9NLH|1|R1|G|2116
9NLH|1|R1|A|2117
9NLH|1|R1|U|2118
9NLH|1|R1|A|2119
9NLH|1|R1|G|2120
*
9NLH|1|R1|C|2178
9NLH|1|R1|C|2179
9NLH|1|R1|U|2180
9NLH|1|R1|U|2181

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL1

Chain H

YheS