IL_9NLH_086

3D structure

PDB id

9NLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with YheS-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUUUGAAGUGUG*UGCAUGGAGCC

Length

24 nucleotides

Bulged bases

9NLH|1|R1|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLH|1|R1|G|2128
9NLH|1|R1|C|2129
9NLH|1|R1|U|2130
9NLH|1|R1|U|2131
9NLH|1|R1|U|2132
9NLH|1|R1|G|2133
9NLH|1|R1|A|2134
9NLH|1|R1|A|2135
9NLH|1|R1|G|2136
9NLH|1|R1|U|2137
9NLH|1|R1|G|2138
9NLH|1|R1|U|2139
9NLH|1|R1|G|2140
*
9NLH|1|R1|U|2151
9NLH|1|R1|G|2152
9NLH|1|R1|C|2153
9NLH|1|R1|A|2154
9NLH|1|R1|U|2155
9NLH|1|R1|G|2156
9NLH|1|R1|G|2157
9NLH|1|R1|A|2158
9NLH|1|R1|G|2159
9NLH|1|R1|C|2160
9NLH|1|R1|C|2161

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL1