IL_9NLH_127

3D structure

PDB id

9NLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with YheS-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAUAACU*AGCUAAUAC

Length

17 nucleotides

Bulged bases

9NLH|1|R3|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLH|1|R3|G|147
9NLH|1|R3|G|148
9NLH|1|R3|A|149
9NLH|1|R3|U|150
9NLH|1|R3|A|151
9NLH|1|R3|A|152
9NLH|1|R3|C|153
9NLH|1|R3|U|154
*
9NLH|1|R3|A|167
9NLH|1|R3|G|168
9NLH|1|R3|C|169
9NLH|1|R3|U|170
9NLH|1|R3|A|171
9NLH|1|R3|A|172
9NLH|1|R3|U|173
9NLH|1|R3|A|174
9NLH|1|R3|C|175

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain st

30S ribosomal protein S20