IL_9NLH_167
3D structure
- PDB id
- 9NLH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli Initiation complex with YheS-EQ2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NLH_167 not in the Motif Atlas
- Geometric match to IL_5J7L_053
- Geometric discrepancy: 0.1591
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9NLH|1|R3|C|1158
9NLH|1|R3|U|1159
9NLH|1|R3|G|1160
9NLH|1|R3|C|1161
*
9NLH|1|R3|G|1175
9NLH|1|R3|A|1176
9NLH|1|R3|G|1177
9NLH|1|R3|G|1178
9NLH|1|R3|A|1179
9NLH|1|R3|A|1180
9NLH|1|R3|G|1181
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain sb
- Small ribosomal subunit protein uS2
- Chain si
- Small ribosomal subunit protein uS9
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