IL_9NLJ_011

3D structure

PDB id

9NLJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with Uup-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCUGAAUCAGUGUGUG*CACAUGCUGUGAGC

Length

31 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLJ|1|R1|G|273
9NLJ|1|R1|C|274
9NLJ|1|R1|C|275
9NLJ|1|R1|U|276
9NLJ|1|R1|G|277
9NLJ|1|R1|A|278
9NLJ|1|R1|A|279
9NLJ|1|R1|U|280
9NLJ|1|R1|C|281
9NLJ|1|R1|A|282
9NLJ|1|R1|G|283
9NLJ|1|R1|U|284
9NLJ|1|R1|G|285
9NLJ|1|R1|U|286
9NLJ|1|R1|G|287
9NLJ|1|R1|U|288
9NLJ|1|R1|G|289
*
9NLJ|1|R1|C|351
9NLJ|1|R1|A|352
9NLJ|1|R1|C|353
9NLJ|1|R1|A|354
9NLJ|1|R1|U|355
9NLJ|1|R1|G|356
9NLJ|1|R1|C|357
9NLJ|1|R1|U|358
9NLJ|1|R1|G|359
9NLJ|1|R1|U|360
9NLJ|1|R1|G|361
9NLJ|1|R1|A|362
9NLJ|1|R1|G|363
9NLJ|1|R1|C|364

Current chains

Chain R1

23S ribosomal RNA

Nearby chains