IL_9NLJ_069

3D structure

PDB id

9NLJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with Uup-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUGAGG*UGGAGCU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLJ|1|R1|G|1718
9NLJ|1|R1|G|1719
9NLJ|1|R1|U|1720
9NLJ|1|R1|G|1721
9NLJ|1|R1|A|1722
9NLJ|1|R1|G|1723
9NLJ|1|R1|G|1724
*
9NLJ|1|R1|U|1736
9NLJ|1|R1|G|1737
9NLJ|1|R1|G|1738
9NLJ|1|R1|A|1739
9NLJ|1|R1|G|1740
9NLJ|1|R1|C|1741
9NLJ|1|R1|U|1742

Current chains

Chain R1

23S ribosomal RNA

Nearby chains