IL_9NLJ_086

3D structure

PDB id

9NLJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with Uup-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUGUGUAGGAUAGGUG*CACCCUU

Length

23 nucleotides

Bulged bases

9NLJ|1|R1|G|2116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLJ|1|R1|A|2108
9NLJ|1|R1|U|2109
9NLJ|1|R1|G|2110
9NLJ|1|R1|U|2111
9NLJ|1|R1|G|2112
9NLJ|1|R1|U|2113
9NLJ|1|R1|A|2114
9NLJ|1|R1|G|2115
9NLJ|1|R1|G|2116
9NLJ|1|R1|A|2117
9NLJ|1|R1|U|2118
9NLJ|1|R1|A|2119
9NLJ|1|R1|G|2120
9NLJ|1|R1|G|2121
9NLJ|1|R1|U|2122
9NLJ|1|R1|G|2123
*
9NLJ|1|R1|C|2175
9NLJ|1|R1|A|2176
9NLJ|1|R1|C|2177
9NLJ|1|R1|C|2178
9NLJ|1|R1|C|2179
9NLJ|1|R1|U|2180
9NLJ|1|R1|U|2181

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL1

Chain U

Uup