IL_9NLJ_129

3D structure

PDB id

9NLJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with Uup-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAGUA*UAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLJ|1|R3|U|249
9NLJ|1|R3|A|250
9NLJ|1|R3|G|251
9NLJ|1|R3|U|252
9NLJ|1|R3|A|253
*
9NLJ|1|R3|U|273
9NLJ|1|R3|A|274
9NLJ|1|R3|G|275

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain R1

Large subunit ribosomal RNA; LSU rRNA

Chain sq

Small ribosomal subunit protein uS17