IL_9NLQ_136

3D structure

PDB id

9NLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Hydrolytic 1/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAAGGGA*UCAUUGAC

Length

15 nucleotides

Bulged bases

9NLQ|1|R3|U|479

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLQ|1|R3|G|450
9NLQ|1|R3|A|451
9NLQ|1|R3|A|452
9NLQ|1|R3|G|453
9NLQ|1|R3|G|454
9NLQ|1|R3|G|455
9NLQ|1|R3|A|456
*
9NLQ|1|R3|U|476
9NLQ|1|R3|C|477
9NLQ|1|R3|A|478
9NLQ|1|R3|U|479
9NLQ|1|R3|U|480
9NLQ|1|R3|G|481
9NLQ|1|R3|A|482
9NLQ|1|R3|C|483

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16