IL_9NLS_112
3D structure
- PDB id
- 9NLS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NLS_112 not in the Motif Atlas
- Homologous match to IL_5J7L_354
- Geometric discrepancy: 0.1046
- The information below is about IL_5J7L_354
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_70411.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9NLS|1|R1|U|2847
9NLS|1|R1|G|2848
9NLS|1|R1|U|2849
9NLS|1|R1|A|2850
9NLS|1|R1|A|2851
9NLS|1|R1|G|2852
*
9NLS|1|R1|U|2865
9NLS|1|R1|U|2866
9NLS|1|R1|G|2867
9NLS|1|R1|A|2868
9NLS|1|R1|G|2869
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 17
- Large ribosomal subunit protein bL17
- Chain 19
- 50S ribosomal protein L19
Coloring options: