IL_9NLS_154
3D structure
- PDB id
- 9NLS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 9NLS|1|R3|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NLS_154 not in the Motif Atlas
- Homologous match to IL_5J7L_039
- Geometric discrepancy: 0.0681
- The information below is about IL_5J7L_039
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
9NLS|1|R3|G|922
9NLS|1|R3|A|923
*
9NLS|1|R3|U|1393
9NLS|1|R3|A|1394
9NLS|1|R3|C|1395
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain se
- Small ribosomal subunit protein uS5
Coloring options: