IL_9O2X_155
3D structure
- PDB id
- 9O2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- 9O2X|1|a|U|2491
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9O2X_155 not in the Motif Atlas
- Homologous match to IL_7A0S_086
- Geometric discrepancy: 0.2172
- The information below is about IL_7A0S_086
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_36931.3
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 26
Unit IDs
9O2X|1|a|A|2459
9O2X|1|a|U|2460
9O2X|1|a|A|2461
*
9O2X|1|a|U|2489
9O2X|1|a|G|2490
9O2X|1|a|U|2491
9O2X|1|a|U|2492
9O2X|1|a|U|2493
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain Y
- A-site tRNAPyl
- Chain l
- Large ribosomal subunit protein uL16
Coloring options: