IL_9O2Y_089

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

UC*GUUA

Length

6 nucleotides

Bulged bases

9O2Y|1|a|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9O2Y_089 not in the Motif Atlas

Geometric match to IL_8B0X_088

Geometric discrepancy: 0.0718

The information below is about IL_8B0X_088

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36175.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

6

Unit IDs

9O2Y|1|a|U|847
9O2Y|1|a|C|848
*
9O2Y|1|a|G|930
9O2Y|1|a|U|931
9O2Y|1|a|U|932
9O2Y|1|a|A|933

Current chains

Chain a

23S rRNA

Nearby chains

Chain y

50S ribosomal protein L30