IL_9O3I_030
3D structure
- PDB id
- 9O3I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GCUAG*CAAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9O3I_030 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.2887
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
9O3I|1|1A|G|875
9O3I|1|1A|C|876
9O3I|1|1A|U|877
9O3I|1|1A|A|878
9O3I|1|1A|G|879
*
9O3I|1|1A|C|898
9O3I|1|1A|A|899
9O3I|1|1A|A|900
9O3I|1|1A|A|901
9O3I|1|1A|C|902
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1Q
- 50S ribosomal protein L16
- Chain 1Z
- 50S ribosomal protein L25
- Chain 1w
- Transfer RNA; tRNA
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