IL_9O3I_084

3D structure

PDB id

9O3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3I|1|1A|G|2124
9O3I|1|1A|G|2125
9O3I|1|1A|A|2126
9O3I|1|1A|G|2127
*
9O3I|1|1A|C|2161
9O3I|1|1A|G|2162
9O3I|1|1A|C|2163
9O3I|1|1A|C|2164
9O3I|1|1A|G|2165
9O3I|1|1A|G|2166
9O3I|1|1A|U|2167
9O3I|1|1A|G|2168
9O3I|1|1A|A|2169
9O3I|1|1A|A|2170
9O3I|1|1A|A|2171
9O3I|1|1A|U|2172
9O3I|1|1A|A|2173
9O3I|1|1A|C|2174

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1y

Transfer RNA; tRNA