3D structure

PDB id
9O3J (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.6 Å

Loop

Sequence
GCUAGGG*UACCAAAC
Length
15 nucleotides
Bulged bases
9O3J|1|1A|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O3J|1|1A|G|875
9O3J|1|1A|C|876
9O3J|1|1A|U|877
9O3J|1|1A|A|878
9O3J|1|1A|G|879
9O3J|1|1A|G|880
9O3J|1|1A|G|881
*
9O3J|1|1A|U|895
9O3J|1|1A|A|896
9O3J|1|1A|C|897
9O3J|1|1A|C|898
9O3J|1|1A|A|899
9O3J|1|1A|A|900
9O3J|1|1A|A|901
9O3J|1|1A|C|902

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1Q
50S ribosomal protein L16
Chain 1Z
50S ribosomal protein L25
Chain 1w
Transfer RNA; tRNA

Coloring options:

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