IL_9O3J_254

3D structure

PDB id

9O3J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

9O3J|1|2A|A|2114, 9O3J|1|2A|G|2115, 9O3J|1|2A|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3J|1|2A|G|2110
9O3J|1|2A|C|2111
9O3J|1|2A|G|2112
9O3J|1|2A|U|2113
9O3J|1|2A|A|2114
9O3J|1|2A|G|2115
9O3J|1|2A|G|2116
9O3J|1|2A|A|2117
9O3J|1|2A|U|2118
9O3J|1|2A|A|2119
9O3J|1|2A|G|2120
*
9O3J|1|2A|C|2178
9O3J|1|2A|C|2179

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA