IL_9O3K_198

3D structure

PDB id

9O3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

9O3K|1|2A|G|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9O3K_198 not in the Motif Atlas

Geometric match to IL_9DFE_023

Geometric discrepancy: 0.0994

The information below is about IL_9DFE_023

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_44465.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

9

Unit IDs

9O3K|1|2A|C|844
9O3K|1|2A|G|845
9O3K|1|2A|C|846
*
9O3K|1|2A|G|931
9O3K|1|2A|G|932
9O3K|1|2A|A|933
9O3K|1|2A|G|934

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 23

50S ribosomal protein L30