IL_9O3W_156

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

GAAACG*CUCGC

Length

11 nucleotides

Bulged bases

9O3W|1|L5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|L5|G|4891
9O3W|1|L5|A|4892
9O3W|1|L5|A|4893
9O3W|1|L5|A|4894
9O3W|1|L5|C|4895
9O3W|1|L5|G|4896
*
9O3W|1|L5|C|4924
9O3W|1|L5|U|4925
9O3W|1|L5|C|4926
9O3W|1|L5|G|4927
9O3W|1|L5|C|4928

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

Large ribosomal subunit protein eL14

Chain LO

Large ribosomal subunit protein uL13