IL_9O3W_164
3D structure
- PDB id
- 9O3W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.9 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9O3W_164 not in the Motif Atlas
- Homologous match to IL_8GLP_179
- Geometric discrepancy: 0.0499
- The information below is about IL_8GLP_179
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
9O3W|1|L5|A|5014
9O3W|1|L5|G|5015
9O3W|1|L5|A|5016
9O3W|1|L5|G|5017
*
9O3W|1|L5|C|5032
9O3W|1|L5|G|5033
9O3W|1|L5|A|5034
9O3W|1|L5|U|5035
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- Large ribosomal subunit protein eL19
- Chain SI
- Small ribosomal subunit protein eS8
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