IL_9O3W_218

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

CGGGG*CAAG

Length

9 nucleotides

Bulged bases

9O3W|1|S2|G|933

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|S2|C|931
9O3W|1|S2|G|932
9O3W|1|S2|G|933
9O3W|1|S2|G|934
9O3W|1|S2|G|935
*
9O3W|1|S2|C|1007
9O3W|1|S2|A|1008
9O3W|1|S2|A|1009
9O3W|1|S2|G|1010

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Lc

Large ribosomal subunit protein eL30

Chain SB

Small ribosomal subunit protein eS1

Chain SN

Small ribosomal subunit protein uS15

Chain Sa

Small ribosomal subunit protein eS26