IL_9O3W_244

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

ACUA*U(OMU)CU

Length

8 nucleotides

Bulged bases

9O3W|1|S2|C|1403, 9O3W|1|S2|U|1404

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|S2|A|1402
9O3W|1|S2|C|1403
9O3W|1|S2|U|1404
9O3W|1|S2|A|1405
*
9O3W|1|S2|U|1441
9O3W|1|S2|OMU|1442
9O3W|1|S2|C|1443
9O3W|1|S2|U|1444

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SD

Small ribosomal subunit protein uS3

Chain SQ

Small ribosomal subunit protein uS9

Chain SU

Small ribosomal subunit protein uS10

Chain Sg

Receptor of activated protein C kinase 1