IL_9O3Y_011

3D structure

PDB id

9O3Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GCUCC*GCCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3Y|1|L5|G|169
9O3Y|1|L5|C|170
9O3Y|1|L5|U|171
9O3Y|1|L5|C|172
9O3Y|1|L5|C|173
*
9O3Y|1|L5|G|263
9O3Y|1|L5|C|264
9O3Y|1|L5|C|265
9O3Y|1|L5|C|266

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein eL13

Chain Lh

Large ribosomal subunit protein uL29