IL_9OV6_009

3D structure

PDB id

9OV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OV6_009 not in the Motif Atlas

Geometric match to IL_9H3G_074

Geometric discrepancy: 0.3201

The information below is about IL_9H3G_074

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OV6|1|A|C|347
9OV6|1|A|G|348
9OV6|1|A|G|349
9OV6|1|A|A|350
9OV6|1|A|G|351
*
9OV6|1|A|C|378
9OV6|1|A|G|379
9OV6|1|A|A|380
9OV6|1|A|A|381
9OV6|1|A|G|382

Current chains

Chain A

RNase P RNA component

Nearby chains