IL_9OWJ_008

3D structure

PDB id

9OWJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 5 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CGAAG*CGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWJ_008 not in the Motif Atlas

Geometric match to IL_8CRE_476

Geometric discrepancy: 0.1165

The information below is about IL_8CRE_476

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OWJ|1|A|C|284
9OWJ|1|A|G|285
9OWJ|1|A|A|286
9OWJ|1|A|A|287
9OWJ|1|A|G|288
*
9OWJ|1|A|C|297
9OWJ|1|A|G|298
9OWJ|1|A|G|299
9OWJ|1|A|A|300
9OWJ|1|A|G|301

Current chains

Chain A

RNase P RNA component

Nearby chains