IL_9OWJ_010

3D structure

PDB id

9OWJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 5 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWJ_010 not in the Motif Atlas

Geometric match to IL_8CRE_476

Geometric discrepancy: 0.2114

The information below is about IL_8CRE_476

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OWJ|1|A|C|347
9OWJ|1|A|G|348
9OWJ|1|A|G|349
9OWJ|1|A|A|350
9OWJ|1|A|G|351
*
9OWJ|1|A|C|378
9OWJ|1|A|G|379
9OWJ|1|A|A|380
9OWJ|1|A|A|381
9OWJ|1|A|G|382

Current chains

Chain A

RNase P RNA component

Nearby chains