IL_9OWM_008

3D structure

PDB id

9OWM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 10 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CGAAG*CGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWM_008 not in the Motif Atlas

Geometric match to IL_8CRE_476

Geometric discrepancy: 0.1266

The information below is about IL_8CRE_476

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OWM|1|A|C|284
9OWM|1|A|G|285
9OWM|1|A|A|286
9OWM|1|A|A|287
9OWM|1|A|G|288
*
9OWM|1|A|C|297
9OWM|1|A|G|298
9OWM|1|A|G|299
9OWM|1|A|A|300
9OWM|1|A|G|301

Current chains

Chain A

RNase P RNA component

Nearby chains