IL_9OWN_008

3D structure

PDB id

9OWN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5' leader (Consensus)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGAAG*CGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWN_008 not in the Motif Atlas

Homologous match to IL_2A64_005

Geometric discrepancy: 0.1833

The information below is about IL_2A64_005

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OWN|1|A|C|284
9OWN|1|A|G|285
9OWN|1|A|A|286
9OWN|1|A|A|287
9OWN|1|A|G|288
*
9OWN|1|A|C|297
9OWN|1|A|G|298
9OWN|1|A|G|299
9OWN|1|A|A|300
9OWN|1|A|G|301

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains