IL_9OWP_010

3D structure

PDB id

9OWP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5' leader (sub-conformation 2 of tRNA anticodon arm tilted)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWP_010 not in the Motif Atlas

Geometric match to IL_8GLP_284

Geometric discrepancy: 0.1725

The information below is about IL_8GLP_284

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OWP|1|A|C|347
9OWP|1|A|G|348
9OWP|1|A|G|349
9OWP|1|A|A|350
9OWP|1|A|G|351
*
9OWP|1|A|C|378
9OWP|1|A|G|379
9OWP|1|A|A|380
9OWP|1|A|A|381
9OWP|1|A|G|382

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains