IL_9OWQ_010

3D structure

PDB id

9OWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with loop-back 5' leader

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWQ_010 not in the Motif Atlas

Homologous match to IL_2A64_006

Geometric discrepancy: 0.2364

The information below is about IL_2A64_006

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OWQ|1|A|C|347
9OWQ|1|A|G|348
9OWQ|1|A|G|349
9OWQ|1|A|A|350
9OWQ|1|A|G|351
*
9OWQ|1|A|C|378
9OWQ|1|A|G|379
9OWQ|1|A|A|380
9OWQ|1|A|A|381
9OWQ|1|A|G|382

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains