IL_9OWS_012

3D structure

PDB id

9OWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P holoenzyme in 5 mM Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

CGGAGU*ACGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWS_012 not in the Motif Atlas

Geometric match to IL_9PN5_025

Geometric discrepancy: 0.3842

The information below is about IL_9PN5_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28265.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

9OWS|1|A|C|347
9OWS|1|A|G|348
9OWS|1|A|G|349
9OWS|1|A|A|350
9OWS|1|A|G|351
9OWS|1|A|U|352
*
9OWS|1|A|A|377
9OWS|1|A|C|378
9OWS|1|A|G|379
9OWS|1|A|A|380
9OWS|1|A|A|381
9OWS|1|A|G|382

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains