IL_9OWU_010

3D structure

PDB id

9OWU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA in 1 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CGGAGU*ACGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWU_010 not in the Motif Atlas

Geometric match to IL_9PN5_025

Geometric discrepancy: 0.3996

The information below is about IL_9PN5_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28265.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

9OWU|1|A|C|347
9OWU|1|A|G|348
9OWU|1|A|G|349
9OWU|1|A|A|350
9OWU|1|A|G|351
9OWU|1|A|U|352
*
9OWU|1|A|A|377
9OWU|1|A|C|378
9OWU|1|A|G|379
9OWU|1|A|A|380
9OWU|1|A|A|381
9OWU|1|A|G|382

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains