IL_9OY2_010

3D structure

PDB id

9OY2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

CGAAG*CGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OY2_010 not in the Motif Atlas

Geometric match to IL_9DFE_075

Geometric discrepancy: 0.1097

The information below is about IL_9DFE_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OY2|1|A|C|284
9OY2|1|A|G|285
9OY2|1|A|A|286
9OY2|1|A|A|287
9OY2|1|A|G|288
*
9OY2|1|A|C|297
9OY2|1|A|G|298
9OY2|1|A|G|299
9OY2|1|A|A|300
9OY2|1|A|G|301

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains