IL_9P6Z_195

3D structure

PDB id

9P6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GCUCCUCUCCCACUU*AUGCCGAC

Length

23 nucleotides

Bulged bases

9P6Z|1|S2|C|131, 9P6Z|1|S2|U|132, 9P6Z|1|S2|C|133, 9P6Z|1|S2|C|134, 9P6Z|1|S2|U|135, 9P6Z|1|S2|C|136, 9P6Z|1|S2|U|137, 9P6Z|1|S2|C|138, 9P6Z|1|S2|C|139, 9P6Z|1|S2|C|142, 9P6Z|1|S2|U|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P6Z|1|S2|G|130
9P6Z|1|S2|C|131
9P6Z|1|S2|U|132
9P6Z|1|S2|C|133
9P6Z|1|S2|C|134
9P6Z|1|S2|U|135
9P6Z|1|S2|C|136
9P6Z|1|S2|U|137
9P6Z|1|S2|C|138
9P6Z|1|S2|C|139
9P6Z|1|S2|C|140
9P6Z|1|S2|A|141
9P6Z|1|S2|C|142
9P6Z|1|S2|U|143
9P6Z|1|S2|U|144
*
9P6Z|1|S2|A|175
9P6Z|1|S2|U|176
9P6Z|1|S2|G|177
9P6Z|1|S2|C|178
9P6Z|1|S2|C|179
9P6Z|1|S2|G|180
9P6Z|1|S2|A|181
9P6Z|1|S2|C|182

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

Ribosomal protein L24

Chain SG

40S ribosomal protein S6