IL_9P72_009

3D structure

PDB id

9P72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCUCCCC*GGGCCC

Length

13 nucleotides

Bulged bases

9P72|1|L5|C|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P72|1|L5|G|169
9P72|1|L5|C|170
9P72|1|L5|U|171
9P72|1|L5|C|172
9P72|1|L5|C|173
9P72|1|L5|C|174
9P72|1|L5|C|175
*
9P72|1|L5|G|261
9P72|1|L5|G|262
9P72|1|L5|G|263
9P72|1|L5|C|264
9P72|1|L5|C|265
9P72|1|L5|C|266

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein eL13

Chain Lh

60S ribosomal protein L35