IL_9P72_277

3D structure

PDB id

9P72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCCCGCC*GCGGAGCG

Length

15 nucleotides

Bulged bases

9P72|1|S2|C|1753, 9P72|1|S2|C|1783

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P72|1|S2|C|1750
9P72|1|S2|C|1751
9P72|1|S2|C|1752
9P72|1|S2|C|1753
9P72|1|S2|G|1754
9P72|1|S2|C|1755
9P72|1|S2|C|1756
*
9P72|1|S2|G|1777
9P72|1|S2|C|1778
9P72|1|S2|G|1779
9P72|1|S2|G|1780
9P72|1|S2|A|1781
9P72|1|S2|G|1782
9P72|1|S2|C|1783
9P72|1|S2|G|1784

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

Ribosomal protein L24

Chain SG

40S ribosomal protein S6