IL_9P73_110

3D structure

PDB id

9P73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human eEF2-A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GGAAGUCGG*CUGU(OMC)

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P73|1|L5|G|2847
9P73|1|L5|G|2848
9P73|1|L5|A|2849
9P73|1|L5|A|2850
9P73|1|L5|G|2851
9P73|1|L5|U|2852
9P73|1|L5|C|2853
9P73|1|L5|G|2854
9P73|1|L5|G|2855
*
9P73|1|L5|C|3837
9P73|1|L5|U|3838
9P73|1|L5|G|3839
9P73|1|L5|U|3840
9P73|1|L5|OMC|3841

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LV

60S ribosomal protein L23