3D structure

PDB id
9P76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human eEF1A-A/T-P state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GGGUC*GGCGCCUAGC
Length
15 nucleotides
Bulged bases
9P76|1|L5|U|3595, 9P76|1|L5|A|3596
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P76|1|L5|G|2901
9P76|1|L5|G|2902
9P76|1|L5|G|2903
9P76|1|L5|U|2904
9P76|1|L5|C|2905
*
9P76|1|L5|G|3589
9P76|1|L5|G|3590
9P76|1|L5|C|3591
9P76|1|L5|G|3592
9P76|1|L5|C|3593
9P76|1|L5|C|3594
9P76|1|L5|U|3595
9P76|1|L5|A|3596
9P76|1|L5|G|3597
9P76|1|L5|C|3598

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LR
60S ribosomal protein L19
Chain SI
40S ribosomal protein S8
Chain SL
40S ribosomal protein S11

Coloring options:

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