IL_9P79_108

3D structure

PDB id

9P79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

9P79|1|L5|G|2902, 9P79|1|L5|A|3596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P79|1|L5|G|2901
9P79|1|L5|G|2902
9P79|1|L5|G|2903
9P79|1|L5|U|2904
9P79|1|L5|C|2905
*
9P79|1|L5|G|3589
9P79|1|L5|G|3590
9P79|1|L5|C|3591
9P79|1|L5|G|3592
9P79|1|L5|C|3593
9P79|1|L5|C|3594
9P79|1|L5|U|3595
9P79|1|L5|A|3596
9P79|1|L5|G|3597
9P79|1|L5|C|3598

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain SL

40S ribosomal protein S11