IL_9P7C_205
3D structure
- PDB id
- 9P7C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Hibernating class3 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CAAU*AAUUG
- Length
- 9 nucleotides
- Bulged bases
- 9P7C|1|S2|U|556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7C_205 not in the Motif Atlas
- Geometric match to IL_9PN5_184
- Geometric discrepancy: 0.2437
- The information below is about IL_9PN5_184
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9P7C|1|S2|C|527
9P7C|1|S2|A|528
9P7C|1|S2|A|529
9P7C|1|S2|U|530
*
9P7C|1|S2|A|554
9P7C|1|S2|A|555
9P7C|1|S2|U|556
9P7C|1|S2|U|557
9P7C|1|S2|G|558
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain SJ
- 40S ribosomal protein S9
- Chain Se
- Small ribosomal subunit protein eS30
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